Protein–RNA interactions for Protein: Q9UH73

EBF1, Transcription factor COE1, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1Q9UH73 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 AL049812.1-201ENST00000432563 2267 ntBASIC18.64■□□□□ 0.57
EBF1Q9UH73 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 IGHGP-201ENST00000390555 1178 ntBASIC18.64■□□□□ 0.57
EBF1Q9UH73 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 AC099336.1-202ENST00000602961 463 ntBASIC18.64■□□□□ 0.57
EBF1Q9UH73 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 LINC00167-201ENST00000530583 1419 ntBASIC18.64■□□□□ 0.57
EBF1Q9UH73 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.64■□□□□ 0.57
EBF1Q9UH73 AC006333.2-201ENST00000607957 2099 ntBASIC18.64■□□□□ 0.57
EBF1Q9UH73 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
EBF1Q9UH73 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 AC034236.2-201ENST00000606662 1610 ntBASIC18.63■□□□□ 0.57
EBF1Q9UH73 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 MRPL3P1-201ENST00000400109 1033 ntBASIC18.63■□□□□ 0.57
EBF1Q9UH73 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 RN7SL606P-201ENST00000472779 293 ntBASIC18.63■□□□□ 0.57
EBF1Q9UH73 GUSBP12-201ENST00000513727 720 ntBASIC18.63■□□□□ 0.57
EBF1Q9UH73 FICD-205ENST00000552758 603 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC18.63■□□□□ 0.57
EBF1Q9UH73 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
EBF1Q9UH73 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 BX640515.1-201ENST00000617215 977 ntBASIC18.62■□□□□ 0.57
EBF1Q9UH73 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.62■□□□□ 0.57
EBF1Q9UH73 HLA-A-201ENST00000376802 1334 ntBASIC18.62■□□□□ 0.57
EBF1Q9UH73 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.62■□□□□ 0.57
EBF1Q9UH73 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
EBF1Q9UH73 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF1Q9UH73 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.61■□□□□ 0.57
EBF1Q9UH73 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF1Q9UH73 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
EBF1Q9UH73 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms