Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ESPNP-201ENST00000270691 2015 ntBASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPHK1Q9NYA1 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 IGHGP-201ENST00000390555 1178 ntBASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 TSPY22P-201ENST00000427496 604 ntBASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AL390719.2-201ENST00000606993 987 ntBASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 AC093458.2-201ENST00000623150 629 ntBASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 GMCL1P1-201ENST00000463439 1581 ntBASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.6■□□□□ 0.41
SPHK1Q9NYA1 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AC009113.1-201ENST00000570267 2443 ntBASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 KRT89P-201ENST00000620027 1478 ntBASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AC016734.2-201ENST00000624325 1377 ntBASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 GPR32P1-201ENST00000601788 811 ntBASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
SPHK1Q9NYA1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms