Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CISHQ9NSE2 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
CISHQ9NSE2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.71
CISHQ9NSE2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
CISHQ9NSE2 LINC01311-201ENST00000565162 1445 ntBASIC19.51■□□□□ 0.71
CISHQ9NSE2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 AL671277.2-201ENST00000458060 996 ntBASIC19.51■□□□□ 0.71
CISHQ9NSE2 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 NTF6B-201ENST00000591913 560 ntBASIC19.51■□□□□ 0.71
CISHQ9NSE2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 AL354751.1-201ENST00000412768 1863 ntBASIC19.51■□□□□ 0.71
CISHQ9NSE2 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CISHQ9NSE2 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.51■□□□□ 0.71
CISHQ9NSE2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 AC083849.1-201ENST00000615227 514 ntBASIC19.5■□□□□ 0.71
CISHQ9NSE2 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
CISHQ9NSE2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.5■□□□□ 0.71
CISHQ9NSE2 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
CISHQ9NSE2 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 ABALON-201ENST00000629058 1903 ntBASIC19.49■□□□□ 0.71
CISHQ9NSE2 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 AC024563.2-201ENST00000603282 481 ntBASIC19.49■□□□□ 0.71
CISHQ9NSE2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
CISHQ9NSE2 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
CISHQ9NSE2 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
CISHQ9NSE2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
CISHQ9NSE2 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms