Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
PRDM9Q9NQV7 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 HBZP1-201ENST00000354915 429 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 PVRIG2P-201ENST00000435460 978 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AC092597.1-201ENST00000487352 616 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ZNF444P1-201ENST00000559497 298 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AL136038.4-201ENST00000603606 1261 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AL121956.5-201ENST00000625261 221 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 AC020763.4-201ENST00000623414 4170 ntBASIC17.29■□□□□ 0.36
PRDM9Q9NQV7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AC083849.1-201ENST00000615227 514 ntBASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AC079602.3-201ENST00000623931 403 ntBASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AC093677.2-201ENST00000600169 1863 ntBASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 AL391807.1-203ENST00000604392 2365 ntBASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
PRDM9Q9NQV7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 ABALON-201ENST00000629058 1903 ntBASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.27■□□□□ 0.36
PRDM9Q9NQV7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms