Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX4Q9NQI0 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.55■■□□□ 1.04
DDX4Q9NQI0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
DDX4Q9NQI0 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
DDX4Q9NQI0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC21.55■■□□□ 1.04
DDX4Q9NQI0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
DDX4Q9NQI0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 FAM197Y8-203ENST00000450145 560 ntBASIC21.53■■□□□ 1.04
DDX4Q9NQI0 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
DDX4Q9NQI0 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 PENK-208ENST00000523051 772 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 AL671883.3-201ENST00000603274 991 ntBASIC21.52■■□□□ 1.04
DDX4Q9NQI0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 AC125634.1-201ENST00000438758 1403 ntBASIC21.52■■□□□ 1.04
DDX4Q9NQI0 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC21.52■■□□□ 1.04
DDX4Q9NQI0 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 AC008608.2-201ENST00000606089 416 ntBASIC21.51■■□□□ 1.03
DDX4Q9NQI0 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 INTS4P1-201ENST00000438455 1935 ntBASIC21.51■■□□□ 1.03
DDX4Q9NQI0 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
DDX4Q9NQI0 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
DDX4Q9NQI0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms