Protein–RNA interactions for Protein: Q9NQ94

A1CF, APOBEC1 complementation factor, humanhuman

Known RBP Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A1CFQ9NQ94 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
A1CFQ9NQ94 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 MINOS1P3-201ENST00000457048 203 ntBASIC20.83■□□□□ 0.93
A1CFQ9NQ94 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 AP002469.2-201ENST00000531724 424 ntBASIC20.83■□□□□ 0.93
A1CFQ9NQ94 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.83■□□□□ 0.93
A1CFQ9NQ94 BNIP3P18-201ENST00000593976 575 ntBASIC20.83■□□□□ 0.93
A1CFQ9NQ94 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
A1CFQ9NQ94 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
A1CFQ9NQ94 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
A1CFQ9NQ94 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
A1CFQ9NQ94 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 AC008687.5-201ENST00000593746 558 ntBASIC20.82■□□□□ 0.92
A1CFQ9NQ94 AL121912.1-201ENST00000603683 238 ntBASIC20.82■□□□□ 0.92
A1CFQ9NQ94 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.82■□□□□ 0.92
A1CFQ9NQ94 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.81■□□□□ 0.92
A1CFQ9NQ94 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 AP000347.1-202ENST00000435868 847 ntBASIC20.81■□□□□ 0.92
A1CFQ9NQ94 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 SLC25A6P4-201ENST00000586535 553 ntBASIC20.81■□□□□ 0.92
A1CFQ9NQ94 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
A1CFQ9NQ94 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 REXO1L6P-202ENST00000619970 1078 ntBASIC20.8■□□□□ 0.92
A1CFQ9NQ94 ANKRD20A8P-203ENST00000641373 517 ntBASIC20.8■□□□□ 0.92
A1CFQ9NQ94 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
A1CFQ9NQ94 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms