Protein–RNA interactions for Protein: Q9HC52

CBX8, Chromobox protein homolog 8, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8Q9HC52 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.47■□□□□ 0.87
CBX8Q9HC52 RPS2P4-201ENST00000476944 856 ntBASIC20.47■□□□□ 0.87
CBX8Q9HC52 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.47■□□□□ 0.87
CBX8Q9HC52 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
CBX8Q9HC52 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.46■□□□□ 0.87
CBX8Q9HC52 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
CBX8Q9HC52 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.46■□□□□ 0.87
CBX8Q9HC52 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
CBX8Q9HC52 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
CBX8Q9HC52 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC20.46■□□□□ 0.87
CBX8Q9HC52 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.45■□□□□ 0.87
CBX8Q9HC52 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
CBX8Q9HC52 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 SDHAP2-201ENST00000455183 2001 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 KRT18P55-202ENST00000578578 1546 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 AC239809.2-201ENST00000415381 517 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 AC142086.2-201ENST00000569753 217 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 AL109923.1-201ENST00000618799 583 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 AP001094.4-201ENST00000579008 2176 ntBASIC20.45■□□□□ 0.86
CBX8Q9HC52 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.45■□□□□ 0.86
CBX8Q9HC52 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
CBX8Q9HC52 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.44■□□□□ 0.86
CBX8Q9HC52 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.44■□□□□ 0.86
CBX8Q9HC52 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.44■□□□□ 0.86
CBX8Q9HC52 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
CBX8Q9HC52 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.44■□□□□ 0.86
CBX8Q9HC52 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.44■□□□□ 0.86
CBX8Q9HC52 KRT17P3-201ENST00000420566 1262 ntBASIC20.44■□□□□ 0.86
CBX8Q9HC52 LY6E-205ENST00000519611 635 ntTSL 3 BASIC20.44■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms