Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SEC1P-202ENST00000473944 940 ntBASIC16.03■□□□□ 0.16
CDH20Q9HBT6 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 AL441883.1-201ENST00000566170 1045 ntBASIC16.03■□□□□ 0.16
CDH20Q9HBT6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 AC006011.2-201ENST00000621313 1158 ntBASIC16.03■□□□□ 0.16
CDH20Q9HBT6 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 NEFHP1-201ENST00000412845 2629 ntBASIC16.03■□□□□ 0.16
CDH20Q9HBT6 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 AL499627.1-201ENST00000569373 2188 ntBASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDH20Q9HBT6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 TSPY5P-201ENST00000426936 936 ntBASIC16.02■□□□□ 0.16
CDH20Q9HBT6 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CDH20Q9HBT6 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CDH20Q9HBT6 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 AC104076.2-201ENST00000448912 469 ntBASIC16.01■□□□□ 0.15
CDH20Q9HBT6 HOMER2P1-201ENST00000455653 964 ntBASIC16.01■□□□□ 0.15
CDH20Q9HBT6 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 AL049597.2-201ENST00000565575 961 ntBASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 MIR3180-4-201ENST00000582223 153 ntBASIC16.01■□□□□ 0.15
CDH20Q9HBT6 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CDH20Q9HBT6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms