Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 MTCL1P1-201ENST00000446207 792 ntBASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.03■□□□□ 0.96
RPAP3Q9H6T3 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 TEX30-205ENST00000376029 959 ntTSL 2 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 CALM1-205ENST00000553542 877 ntTSL 5 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 AC148477.8-201ENST00000624298 468 ntBASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
RPAP3Q9H6T3 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
RPAP3Q9H6T3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.95
RPAP3Q9H6T3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.02■□□□□ 0.95
RPAP3Q9H6T3 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
RPAP3Q9H6T3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 AC005082.1-201ENST00000413042 2259 ntBASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 MED22-202ENST00000371999 987 ntTSL 3 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 KRT18P67-201ENST00000432816 1264 ntBASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 IRF8-202ENST00000562492 946 ntTSL 3 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 AC023511.2-201ENST00000618803 211 ntBASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 NME4-212ENST00000621774 904 ntTSL 3 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RPAP3Q9H6T3 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC21■□□□□ 0.95
RPAP3Q9H6T3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21■□□□□ 0.95
RPAP3Q9H6T3 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms