Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 TSPY12P-201ENST00000421279 868 ntBASIC19.73■□□□□ 0.75
NXF3Q9H4D5 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 VENTXP7-201ENST00000475503 772 ntBASIC19.73■□□□□ 0.75
NXF3Q9H4D5 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
NXF3Q9H4D5 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 AC026396.1-201ENST00000419388 421 ntBASIC19.72■□□□□ 0.75
NXF3Q9H4D5 KRT18P31-201ENST00000506277 1292 ntBASIC19.72■□□□□ 0.75
NXF3Q9H4D5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 AC011840.4-201ENST00000578471 627 ntBASIC19.72■□□□□ 0.75
NXF3Q9H4D5 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 AL121772.3-201ENST00000610840 674 ntBASIC19.72■□□□□ 0.75
NXF3Q9H4D5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
NXF3Q9H4D5 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 AC246785.2-201ENST00000432512 513 ntBASIC19.71■□□□□ 0.75
NXF3Q9H4D5 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 AC091304.2-201ENST00000564639 760 ntBASIC19.71■□□□□ 0.75
NXF3Q9H4D5 AL353801.3-201ENST00000609898 542 ntBASIC19.71■□□□□ 0.75
NXF3Q9H4D5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
NXF3Q9H4D5 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.7■□□□□ 0.74
NXF3Q9H4D5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
NXF3Q9H4D5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms