Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 TSPY18P-201ENST00000441642 509 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 AL020996.1-203ENST00000536896 2307 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 AC091304.2-201ENST00000564639 760 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 AC074051.2-201ENST00000565115 352 ntBASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATXN3LQ9H3M9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.66
ATXN3LQ9H3M9 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AC246785.2-201ENST00000432512 513 ntBASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 KRT18P41-201ENST00000518924 1277 ntBASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.2■□□□□ 0.66
ATXN3LQ9H3M9 AL353692.3-201ENST00000407031 1396 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AC233702.3-201ENST00000578656 1387 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 LINC00167-201ENST00000530583 1419 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 LINC01711-201ENST00000598340 967 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 Z69720.1-201ENST00000601483 472 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AL592071.1-201ENST00000611956 408 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AC083906.6-201ENST00000641366 219 ntBASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.19■□□□□ 0.66
ATXN3LQ9H3M9 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 KRT89P-201ENST00000620027 1478 ntBASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 FAAHP1-202ENST00000446499 1238 ntBASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 AC138894.3-201ENST00000603787 634 ntBASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
ATXN3LQ9H3M9 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms