Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
FOXP3Q9BZS1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 AL137013.1-201ENST00000432946 1228 ntBASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 AL590326.2-201ENST00000625139 305 ntBASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
FOXP3Q9BZS1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 REXO1L9P-201ENST00000604264 2108 ntBASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 TERF1P1-201ENST00000311003 1181 ntBASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 AC091390.4-202ENST00000476426 537 ntBASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
FOXP3Q9BZS1 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AC004951.3-201ENST00000418645 1148 ntBASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CKBP1-201ENST00000565489 1086 ntBASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.9■□□□□ 0.62
FOXP3Q9BZS1 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
FOXP3Q9BZS1 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
FOXP3Q9BZS1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.89■□□□□ 0.62
FOXP3Q9BZS1 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.89■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms