Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 AC093503.3-201ENST00000624917 2352 ntBASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.29■□□□□ 0.04
SSBP3Q9BWW4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 AC112777.1-201ENST00000540175 1423 ntBASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 NAA38-203ENST00000575071 553 ntTSL 2 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 LETM1P2-201ENST00000597330 2178 ntBASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 AL162741.1-201ENST00000565563 1558 ntBASIC15.28■□□□□ 0.04
SSBP3Q9BWW4 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC15.27■□□□□ 0.04
SSBP3Q9BWW4 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 AL163051.1-201ENST00000569214 1512 ntBASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
SSBP3Q9BWW4 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
SSBP3Q9BWW4 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms