Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 B3GAT3P1-201ENST00000471720 806 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 KRT18P41-201ENST00000518924 1277 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 MIR4785-201ENST00000585005 73 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 MIR6786-201ENST00000616843 113 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 REXO1L12P-201ENST00000622156 912 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 ABALON-201ENST00000629058 1903 ntBASIC16.7■□□□□ 0.26
SNX18Q96RF0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SNX18Q96RF0 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 AC008040.2-201ENST00000461049 708 ntBASIC16.69■□□□□ 0.26
SNX18Q96RF0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 AP000692.2-201ENST00000608391 879 ntBASIC16.69■□□□□ 0.26
SNX18Q96RF0 AC113410.3-201ENST00000623366 203 ntBASIC16.69■□□□□ 0.26
SNX18Q96RF0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SNX18Q96RF0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 ESPNP-201ENST00000270691 2015 ntBASIC16.69■□□□□ 0.26
SNX18Q96RF0 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC16.69■□□□□ 0.26
SNX18Q96RF0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 AC011506.1-201ENST00000474329 610 ntBASIC16.68■□□□□ 0.26
SNX18Q96RF0 BX088651.1-201ENST00000540551 451 ntBASIC16.68■□□□□ 0.26
SNX18Q96RF0 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SNX18Q96RF0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.68■□□□□ 0.26
SNX18Q96RF0 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms