Protein–RNA interactions for Protein: Q96PU5

NEDD4L, E3 ubiquitin-protein ligase NEDD4-like, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4LQ96PU5 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 AL596257.1-201ENST00000641463 2694 ntBASIC16.22■□□□□ 0.19
NEDD4LQ96PU5 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 OR2A1-AS1-207ENST00000486094 819 ntBASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 AP001094.4-201ENST00000579008 2176 ntBASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.21■□□□□ 0.19
NEDD4LQ96PU5 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
NEDD4LQ96PU5 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 PNMA6B-201ENST00000538162 1200 ntBASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AC060766.5-201ENST00000590539 871 ntBASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AC120498.8-201ENST00000614275 531 ntBASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AL121829.2-201ENST00000620908 328 ntBASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
NEDD4LQ96PU5 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.19■□□□□ 0.18
NEDD4LQ96PU5 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms