Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
COL21A1Q96P44 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
COL21A1Q96P44 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 AL162741.1-201ENST00000565563 1558 ntBASIC17.32■□□□□ 0.36
COL21A1Q96P44 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 LINC01023-201ENST00000606054 436 ntBASIC17.32■□□□□ 0.36
COL21A1Q96P44 AC097493.4-201ENST00000641197 219 ntBASIC17.32■□□□□ 0.36
COL21A1Q96P44 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
COL21A1Q96P44 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC17.32■□□□□ 0.36
COL21A1Q96P44 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 KRT8P45-201ENST00000414328 1447 ntBASIC17.31■□□□□ 0.36
COL21A1Q96P44 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AC067852.2-201ENST00000590513 2313 ntBASIC17.31■□□□□ 0.36
COL21A1Q96P44 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AL023284.2-201ENST00000405850 579 ntBASIC17.31■□□□□ 0.36
COL21A1Q96P44 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.31■□□□□ 0.36
COL21A1Q96P44 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AC012306.2-201ENST00000609350 630 ntBASIC17.31■□□□□ 0.36
COL21A1Q96P44 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
COL21A1Q96P44 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
COL21A1Q96P44 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 PXK-206ENST00000463280 2825 ntTSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 GPAT2P1-201ENST00000444924 1672 ntBASIC17.3■□□□□ 0.36
COL21A1Q96P44 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
COL21A1Q96P44 HMGA1P5-201ENST00000412453 271 ntBASIC17.3■□□□□ 0.36
COL21A1Q96P44 MCCD1P1-208ENST00000445732 328 ntBASIC17.3■□□□□ 0.36
COL21A1Q96P44 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.3■□□□□ 0.36
COL21A1Q96P44 FAM87A-204ENST00000613235 858 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms