Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC105339.3-201ENST00000560043 636 ntBASIC17.89■□□□□ 0.45
CFAP54Q96N23 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 AL158211.5-201ENST00000623583 2518 ntBASIC17.89■□□□□ 0.45
CFAP54Q96N23 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.89■□□□□ 0.45
CFAP54Q96N23 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CFAP54Q96N23 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 UGT1A2P-201ENST00000454886 866 ntBASIC17.88■□□□□ 0.45
CFAP54Q96N23 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 AP000344.2-201ENST00000512987 629 ntBASIC17.88■□□□□ 0.45
CFAP54Q96N23 RNA5SP421-201ENST00000516864 134 ntBASIC17.88■□□□□ 0.45
CFAP54Q96N23 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.88■□□□□ 0.45
CFAP54Q96N23 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.88■□□□□ 0.45
CFAP54Q96N23 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CFAP54Q96N23 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 AC108751.1-201ENST00000490852 363 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 AC093214.1-201ENST00000511688 1107 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 RPS29-206ENST00000557111 488 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 AC084346.2-201ENST00000607097 949 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 METTL23-205ENST00000588302 925 ntTSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 MIR6799-201ENST00000620297 69 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 AC020907.5-201ENST00000624372 1936 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CFAP54Q96N23 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 AC093520.2-201ENST00000561830 333 ntBASIC17.87■□□□□ 0.45
CFAP54Q96N23 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CFAP54Q96N23 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 PUS1-205ENST00000535067 838 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 AC005082.1-201ENST00000413042 2259 ntBASIC17.86■□□□□ 0.45
CFAP54Q96N23 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.86■□□□□ 0.45
CFAP54Q96N23 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CFAP54Q96N23 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms