Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 AC011676.5-201ENST00000624864 2660 ntBASIC14.01□□□□□ -0.17
LINC00479Q96M42 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.01□□□□□ -0.17
LINC00479Q96M42 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.01□□□□□ -0.17
LINC00479Q96M42 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
LINC00479Q96M42 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC14□□□□□ -0.17
LINC00479Q96M42 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC14□□□□□ -0.17
LINC00479Q96M42 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 NKILA-202ENST00000614771 2598 ntBASIC14□□□□□ -0.17
LINC00479Q96M42 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC14□□□□□ -0.17
LINC00479Q96M42 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC14□□□□□ -0.17
LINC00479Q96M42 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14□□□□□ -0.17
LINC00479Q96M42 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 PHGDH-209ENST00000641074 1780 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 AC008894.3-201ENST00000624324 3103 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 PPP1R14BP2-201ENST00000426284 444 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 CROCCP5-201ENST00000436658 830 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 AC026185.1-201ENST00000445748 174 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 THEM4-205ENST00000489410 643 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 Z85996.1-201ENST00000494644 937 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 MYC-209ENST00000641252 345 ntBASIC13.99□□□□□ -0.17
LINC00479Q96M42 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LINC00479Q96M42 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.99□□□□□ -0.17
LINC00479Q96M42 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms