Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SNX27Q96L92 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.72■□□□□ 0.75
SNX27Q96L92 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
SNX27Q96L92 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SNX27Q96L92 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
SNX27Q96L92 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.71■□□□□ 0.75
SNX27Q96L92 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNX27Q96L92 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.71■□□□□ 0.75
SNX27Q96L92 IGHV3-41-201ENST00000613121 348 ntBASIC19.71■□□□□ 0.75
SNX27Q96L92 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.71■□□□□ 0.75
SNX27Q96L92 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
SNX27Q96L92 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 TNXA-203ENST00000507684 2038 ntBASIC19.71■□□□□ 0.75
SNX27Q96L92 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
SNX27Q96L92 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
SNX27Q96L92 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX27Q96L92 LINC00265-3P-201ENST00000447588 903 ntBASIC19.7■□□□□ 0.74
SNX27Q96L92 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.7■□□□□ 0.74
SNX27Q96L92 TOB2P1-201ENST00000469761 992 ntBASIC19.7■□□□□ 0.74
SNX27Q96L92 GUSBP12-201ENST00000513727 720 ntBASIC19.7■□□□□ 0.74
SNX27Q96L92 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX27Q96L92 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.7■□□□□ 0.74
SNX27Q96L92 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.7■□□□□ 0.74
SNX27Q96L92 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
SNX27Q96L92 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SNX27Q96L92 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SNX27Q96L92 AC073592.3-201ENST00000625118 1834 ntBASIC19.69■□□□□ 0.74
SNX27Q96L92 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.69■□□□□ 0.74
SNX27Q96L92 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SNX27Q96L92 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX27Q96L92 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.69■□□□□ 0.74
SNX27Q96L92 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SNX27Q96L92 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.69■□□□□ 0.74
SNX27Q96L92 AC093503.3-201ENST00000624917 2352 ntBASIC19.69■□□□□ 0.74
SNX27Q96L92 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.68■□□□□ 0.74
SNX27Q96L92 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
SNX27Q96L92 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SNX27Q96L92 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.68■□□□□ 0.74
SNX27Q96L92 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SNX27Q96L92 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms