Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCD1Q96GM5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 HCG4P8-203ENST00000443049 980 ntBASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.22■□□□□ 0.67
SMARCD1Q96GM5 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 AP002383.4-201ENST00000442518 975 ntBASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SMARCD1Q96GM5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 GUSBP12-201ENST00000513727 720 ntBASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 AP002414.4-201ENST00000589764 1148 ntBASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 AC092119.3-201ENST00000612618 583 ntBASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SMARCD1Q96GM5 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 IGHV3-41-201ENST00000613121 348 ntBASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SMARCD1Q96GM5 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms