Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CPNE4Q96A23 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.44■□□□□ 0.22
CPNE4Q96A23 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 AC004408.2-201ENST00000623613 2777 ntBASIC16.43■□□□□ 0.22
CPNE4Q96A23 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 AL136038.3-201ENST00000561909 1096 ntBASIC16.43■□□□□ 0.22
CPNE4Q96A23 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CPNE4Q96A23 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CPNE4Q96A23 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 AC073592.3-201ENST00000625118 1834 ntBASIC16.42■□□□□ 0.22
CPNE4Q96A23 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 VENTXP5-201ENST00000523979 775 ntBASIC16.42■□□□□ 0.22
CPNE4Q96A23 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CPNE4Q96A23 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CPNE4Q96A23 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 SDHAP2-201ENST00000455183 2001 ntBASIC16.41■□□□□ 0.22
CPNE4Q96A23 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CPNE4Q96A23 AC020916.1-201ENST00000587762 1774 ntBASIC16.41■□□□□ 0.22
CPNE4Q96A23 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CPNE4Q96A23 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE4Q96A23 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CPNE4Q96A23 AC126763.1-201ENST00000552015 2118 ntBASIC16.4■□□□□ 0.22
CPNE4Q96A23 AL138781.2-201ENST00000617896 1843 ntBASIC16.4■□□□□ 0.22
CPNE4Q96A23 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CPNE4Q96A23 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE4Q96A23 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE4Q96A23 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.4■□□□□ 0.22
CPNE4Q96A23 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE4Q96A23 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CPNE4Q96A23 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms