Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC23.35■■□□□ 1.33
SMARCC1Q92922 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
SMARCC1Q92922 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 MYLKP1-201ENST00000509077 1580 ntBASIC23.34■■□□□ 1.33
SMARCC1Q92922 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
SMARCC1Q92922 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
SMARCC1Q92922 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
SMARCC1Q92922 PMS2P2-201ENST00000425039 1128 ntBASIC23.33■■□□□ 1.33
SMARCC1Q92922 FIS1-203ENST00000442303 631 ntTSL 3 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 AL139424.1-201ENST00000607572 797 ntBASIC23.33■■□□□ 1.33
SMARCC1Q92922 AC107918.4-202ENST00000641623 219 ntBASIC23.33■■□□□ 1.33
SMARCC1Q92922 AC079781.4-201ENST00000641908 219 ntBASIC23.33■■□□□ 1.33
SMARCC1Q92922 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
SMARCC1Q92922 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC1Q92922 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC23.33■■□□□ 1.32
SMARCC1Q92922 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
SMARCC1Q92922 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
SMARCC1Q92922 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 LINC00602-201ENST00000629776 2065 ntBASIC23.32■■□□□ 1.32
SMARCC1Q92922 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 SRP19-202ENST00000445150 833 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 AC112482.1-201ENST00000492080 688 ntBASIC23.32■■□□□ 1.32
SMARCC1Q92922 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 NKAPP1-205ENST00000585790 367 ntBASIC23.32■■□□□ 1.32
SMARCC1Q92922 MTDHP4-201ENST00000600287 670 ntBASIC23.32■■□□□ 1.32
SMARCC1Q92922 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
SMARCC1Q92922 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
SMARCC1Q92922 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 HMGN1P19-201ENST00000436976 333 ntBASIC23.31■■□□□ 1.32
SMARCC1Q92922 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 URGCP-206ENST00000446958 365 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 DHDH-204ENST00000523250 634 ntTSL 5 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 UNC93B6-202ENST00000528242 690 ntBASIC23.31■■□□□ 1.32
SMARCC1Q92922 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
SMARCC1Q92922 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC23.31■■□□□ 1.32
SMARCC1Q92922 AL032819.2-201ENST00000624543 2162 ntBASIC23.31■■□□□ 1.32
SMARCC1Q92922 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.31■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms