Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
RAB40AQ8WXH6 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 AL445675.2-201ENST00000620291 557 ntBASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 AL031985.4-201ENST00000642138 673 ntBASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 AC012317.2-201ENST00000623305 2251 ntBASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 RCC2P6-201ENST00000526625 1557 ntBASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
RAB40AQ8WXH6 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 AL499627.1-201ENST00000569373 2188 ntBASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 MTMR9LP-203ENST00000426597 1545 ntBASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 TSPY23P-201ENST00000440136 739 ntBASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB40AQ8WXH6 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 TSPY15P-201ENST00000457163 923 ntBASIC16.1■□□□□ 0.17
RAB40AQ8WXH6 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms