Protein–RNA interactions for Protein: Q8WU68

U2AF1L4, Splicing factor U2AF 26 kDa subunit, humanhuman

Known RBP Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4Q8WU68 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.92■□□□□ 0.94
U2AF1L4Q8WU68 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
U2AF1L4Q8WU68 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 POM121L3P-201ENST00000419331 1163 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 AC018712.1-201ENST00000455767 687 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 TNXA-203ENST00000507684 2038 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 KRT8P3-201ENST00000519669 1449 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 AC027796.2-201ENST00000575326 344 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 AC140113.2-201ENST00000604370 208 ntBASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
U2AF1L4Q8WU68 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 PGAM5P1-201ENST00000518923 814 ntBASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 AL591684.3-201ENST00000605187 298 ntBASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
U2AF1L4Q8WU68 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
U2AF1L4Q8WU68 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.89■□□□□ 0.94
U2AF1L4Q8WU68 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
U2AF1L4Q8WU68 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
U2AF1L4Q8WU68 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.89■□□□□ 0.94
U2AF1L4Q8WU68 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 CAND2-206ENST00000626378 333 ntTSL 5 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 ZNF815P-204ENST00000434898 1737 ntBASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
U2AF1L4Q8WU68 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.88■□□□□ 0.93
U2AF1L4Q8WU68 MIR5100-201ENST00000579544 119 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms