Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 MIR149-201ENST00000384879 89 ntBASIC19.23■□□□□ 0.67
RNF139Q8WU17 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 DBP-204ENST00000599385 709 ntTSL 3 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 AC090164.3-201ENST00000610780 2143 ntBASIC19.23■□□□□ 0.67
RNF139Q8WU17 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 AC073592.3-201ENST00000625118 1834 ntBASIC19.23■□□□□ 0.67
RNF139Q8WU17 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.23■□□□□ 0.67
RNF139Q8WU17 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RNF139Q8WU17 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
RNF139Q8WU17 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RNF139Q8WU17 AC009102.3-201ENST00000623118 1491 ntBASIC19.22■□□□□ 0.67
RNF139Q8WU17 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 HLA-F-220ENST00000434407 884 ntBASIC19.21■□□□□ 0.67
RNF139Q8WU17 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 FAM86EP-206ENST00000510506 987 ntBASIC19.21■□□□□ 0.67
RNF139Q8WU17 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 AL136038.3-201ENST00000561909 1096 ntBASIC19.21■□□□□ 0.67
RNF139Q8WU17 AC091076.1-201ENST00000610741 619 ntBASIC19.21■□□□□ 0.67
RNF139Q8WU17 AL358472.4-201ENST00000633140 710 ntBASIC19.21■□□□□ 0.67
RNF139Q8WU17 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.21■□□□□ 0.67
RNF139Q8WU17 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RNF139Q8WU17 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF139Q8WU17 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF139Q8WU17 PCED1CP-201ENST00000419887 785 ntBASIC19.2■□□□□ 0.66
RNF139Q8WU17 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms