Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 AKR1C7P-201ENST00000305623 895 ntBASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 KRT16P4-201ENST00000453883 522 ntBASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 AC009078.2-202ENST00000463353 338 ntBASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 TPM1-218ENST00000559281 851 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SH3RF3Q8TEJ3 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 KRT8P10-201ENST00000450021 1447 ntBASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 BMF-207ENST00000559701 630 ntTSL 3 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SH3RF3Q8TEJ3 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 LINC01711-201ENST00000598340 967 ntBASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 AP000974.1-201ENST00000623909 2387 ntBASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SH3RF3Q8TEJ3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 AC009154.2-201ENST00000621177 724 ntBASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SH3RF3Q8TEJ3 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms