Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAF3IP1Q8TDR0 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 KRT8P7-201ENST00000533003 1432 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 TSPY14P-201ENST00000303979 915 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 NAPSB-206ENST00000562112 1266 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 WWOX-216ENST00000569818 525 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 AC010653.2-201ENST00000623505 997 ntBASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
TRAF3IP1Q8TDR0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 HOXB1-202ENST00000577092 1414 ntBASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 EGLN1P1-201ENST00000531623 762 ntBASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 AC099343.3-201ENST00000605834 2503 ntBASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRAF3IP1Q8TDR0 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 NOC2LP1-202ENST00000452600 2235 ntBASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 GMCL1P1-201ENST00000463439 1581 ntBASIC19.08■□□□□ 0.65
TRAF3IP1Q8TDR0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 MMP23A-201ENST00000234610 1017 ntBASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC19.08■□□□□ 0.64
TRAF3IP1Q8TDR0 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms