Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC11.92□□□□□ -0.5
SMIM11BQ8TCY0 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 AL096828.2-201ENST00000567259 1965 ntBASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 GPX1P1-201ENST00000388829 606 ntBASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 AC069236.1-201ENST00000604339 616 ntBASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 AC068338.2-201ENST00000563278 1430 ntBASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.91□□□□□ -0.5
SMIM11BQ8TCY0 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CICP6-201ENST00000457191 2729 ntBASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 TUBB8P6-201ENST00000436895 1288 ntBASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 AC110285.6-201ENST00000617652 491 ntBASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
SMIM11BQ8TCY0 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms