Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 KRT8P10-201ENST00000450021 1447 ntBASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 RN7SL606P-201ENST00000472779 293 ntBASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 KRT18P41-201ENST00000518924 1277 ntBASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 AC138894.3-201ENST00000603787 634 ntBASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
SHKBP1Q8TBC3 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 AC124864.1-201ENST00000623408 392 ntBASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SHKBP1Q8TBC3 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AL353692.3-201ENST00000407031 1396 ntBASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 GUSBP12-201ENST00000513727 720 ntBASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AL031008.1-201ENST00000619963 541 ntBASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 KRT89P-201ENST00000620027 1478 ntBASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.19■□□□□ 0.66
SHKBP1Q8TBC3 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 IGHV3-47-201ENST00000425060 335 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 AC009078.2-202ENST00000463353 338 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 Z69720.1-201ENST00000601483 472 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 AC099336.1-202ENST00000602961 463 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 AL163051.1-201ENST00000569214 1512 ntBASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHKBP1Q8TBC3 AL161938.1-201ENST00000569833 2180 ntBASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHKBP1Q8TBC3 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms