Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 FP236383.1-201ENST00000623860 2498 ntTSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 AL365181.3-201ENST00000605886 3222 ntBASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 DRC7-203ENST00000394337 2906 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 AP001781.3-201ENST00000622211 2939 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 AL118506.1-201ENST00000601296 3082 ntBASIC11.44□□□□□ -0.58
SVIPQ8NHG7 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
SVIPQ8NHG7 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 COCH-203ENST00000460581 2688 ntTSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 EME1-201ENST00000338165 2339 ntAPPRIS P3 TSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 SLC4A5-202ENST00000358683 3142 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 RCAN1-202ENST00000381132 2408 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 FKBP9-212ENST00000490776 2699 ntTSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 MBP-202ENST00000355994 2772 ntTSL 5 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC11.43□□□□□ -0.58
SVIPQ8NHG7 AC006058.4-201ENST00000624016 1670 ntBASIC11.43□□□□□ -0.58
SVIPQ8NHG7 AC092145.1-201ENST00000564809 2434 ntBASIC11.43□□□□□ -0.58
SVIPQ8NHG7 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 BTN3A2-202ENST00000377708 1634 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 NFIB-206ENST00000397575 2869 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 AC041040.2-201ENST00000622926 2899 ntBASIC11.42□□□□□ -0.58
SVIPQ8NHG7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
SVIPQ8NHG7 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC11.42□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms