Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 AL136038.4-201ENST00000603606 1261 ntBASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 GMCL1P1-201ENST00000463439 1581 ntBASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.1■□□□□ 0.97
CCDC148Q8NFR7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 AC112907.2-201ENST00000448639 330 ntBASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 AC009113.1-201ENST00000570267 2443 ntBASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 LETM1P2-201ENST00000597330 2178 ntBASIC21.09■□□□□ 0.97
CCDC148Q8NFR7 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 AC099343.3-201ENST00000605834 2503 ntBASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 NME3-204ENST00000563498 920 ntTSL 2 BASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 AL162741.1-201ENST00000565563 1558 ntBASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 AC008687.5-201ENST00000593746 558 ntBASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.08■□□□□ 0.97
CCDC148Q8NFR7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
CCDC148Q8NFR7 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 AL391807.1-203ENST00000604392 2365 ntBASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 AC079602.3-201ENST00000623931 403 ntBASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 AC104581.1-202ENST00000635932 2618 ntBASIC21.07■□□□□ 0.96
CCDC148Q8NFR7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.07■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms