Protein–RNA interactions for Protein: Q8NB78

KDM1B, Lysine-specific histone demethylase 1B, humanhuman

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1BQ8NB78 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 AC112777.1-201ENST00000540175 1423 ntBASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 RNF126P1-202ENST00000569893 925 ntBASIC18.69■□□□□ 0.58
KDM1BQ8NB78 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
KDM1BQ8NB78 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 MIR149-201ENST00000384879 89 ntBASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 AC008687.5-201ENST00000593746 558 ntBASIC18.68■□□□□ 0.58
KDM1BQ8NB78 AL390719.2-201ENST00000606993 987 ntBASIC18.68■□□□□ 0.58
KDM1BQ8NB78 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 BICD1-207ENST00000551848 1962 ntBASIC18.68■□□□□ 0.58
KDM1BQ8NB78 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
KDM1BQ8NB78 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 LETM1P2-201ENST00000597330 2178 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 AP002383.4-201ENST00000442518 975 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 KRT126P-201ENST00000549467 1181 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 MIR3180-1-201ENST00000580374 94 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 AC090616.6-201ENST00000582640 721 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 MIR3180-3-201ENST00000584616 94 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 AC005332.3-201ENST00000589904 676 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 AC092329.2-201ENST00000598402 547 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 GPR32P1-201ENST00000601788 811 ntBASIC18.67■□□□□ 0.58
KDM1BQ8NB78 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
KDM1BQ8NB78 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms