Protein–RNA interactions for Protein: Q8N427

NME8, Thioredoxin domain-containing protein 3, humanhuman

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NME8Q8N427 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
NME8Q8N427 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.15■□□□□ 0.82
NME8Q8N427 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.82
NME8Q8N427 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
NME8Q8N427 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
NME8Q8N427 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
NME8Q8N427 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.14■□□□□ 0.81
NME8Q8N427 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
NME8Q8N427 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 EMBP1-201ENST00000458200 901 ntBASIC20.14■□□□□ 0.81
NME8Q8N427 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 ABR-217ENST00000572441 563 ntTSL 4 BASIC20.14■□□□□ 0.81
NME8Q8N427 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC20.14■□□□□ 0.81
NME8Q8N427 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.14■□□□□ 0.81
NME8Q8N427 AC099336.1-202ENST00000602961 463 ntBASIC20.14■□□□□ 0.81
NME8Q8N427 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NME8Q8N427 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
NME8Q8N427 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NME8Q8N427 AC087289.5-201ENST00000586076 3175 ntBASIC20.14■□□□□ 0.81
NME8Q8N427 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
NME8Q8N427 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.13■□□□□ 0.81
NME8Q8N427 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
NME8Q8N427 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.13■□□□□ 0.81
NME8Q8N427 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.13■□□□□ 0.81
NME8Q8N427 KRT16P4-201ENST00000453883 522 ntBASIC20.13■□□□□ 0.81
NME8Q8N427 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC20.13■□□□□ 0.81
NME8Q8N427 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
NME8Q8N427 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
NME8Q8N427 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.13■□□□□ 0.81
NME8Q8N427 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
NME8Q8N427 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
NME8Q8N427 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.12■□□□□ 0.81
NME8Q8N427 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 HCG11-201ENST00000411553 5696 ntBASIC20.12■□□□□ 0.81
NME8Q8N427 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 POM121L3P-201ENST00000419331 1163 ntBASIC20.12■□□□□ 0.81
NME8Q8N427 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC20.12■□□□□ 0.81
NME8Q8N427 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 FICD-205ENST00000552758 603 ntTSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.12■□□□□ 0.81
NME8Q8N427 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.12■□□□□ 0.81
NME8Q8N427 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
NME8Q8N427 NSUN5P1-202ENST00000421140 1535 ntBASIC20.12■□□□□ 0.81
NME8Q8N427 NSUN5P2-203ENST00000457352 1529 ntBASIC20.12■□□□□ 0.81
NME8Q8N427 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
NME8Q8N427 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 KRT8P10-201ENST00000450021 1447 ntBASIC20.11■□□□□ 0.81
NME8Q8N427 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
NME8Q8N427 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.11■□□□□ 0.81
NME8Q8N427 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.11■□□□□ 0.81
NME8Q8N427 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.11■□□□□ 0.81
NME8Q8N427 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 SDHAP2-201ENST00000455183 2001 ntBASIC20.11■□□□□ 0.81
NME8Q8N427 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
NME8Q8N427 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
NME8Q8N427 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
NME8Q8N427 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms