Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 AC093677.2-201ENST00000600169 1863 ntBASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CROCCP3Q8IVE0 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 PCDHA14-201ENST00000506751 2298 ntBASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CROCCP3Q8IVE0 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.61■□□□□ 0.25
CROCCP3Q8IVE0 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 CYP2T3P-201ENST00000601990 817 ntBASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 AC008406.3-201ENST00000620001 1374 ntBASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CROCCP3Q8IVE0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms