Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 AC139530.3-201ENST00000620344 690 ntBASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 AC125634.1-201ENST00000438758 1403 ntBASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
NPAS4Q8IUM7 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS4Q8IUM7 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS4Q8IUM7 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.58■□□□□ 0.73
NPAS4Q8IUM7 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
NPAS4Q8IUM7 RPS2P28-201ENST00000314255 741 ntBASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
NPAS4Q8IUM7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 LINC00602-201ENST00000629776 2065 ntBASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 HNRNPDP1-201ENST00000439535 754 ntBASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 RPL13AP23-201ENST00000480739 586 ntBASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
NPAS4Q8IUM7 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 KRT18P65-201ENST00000439811 1286 ntBASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 RPL18-209ENST00000550645 463 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 AC005332.7-201ENST00000614046 2005 ntBASIC19.56■□□□□ 0.72
NPAS4Q8IUM7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.55■□□□□ 0.72
NPAS4Q8IUM7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms