Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.81■□□□□ 0.44
RNF111Q6ZNA4 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC008040.2-201ENST00000461049 708 ntBASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SLC25A1P4-201ENST00000567977 778 ntBASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AP000692.2-201ENST00000608391 879 ntBASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RNF111Q6ZNA4 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC138028.4-201ENST00000564984 1845 ntBASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC097488.1-201ENST00000507834 756 ntBASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 AC093677.2-201ENST00000600169 1863 ntBASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF111Q6ZNA4 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 AD000864.1-201ENST00000624076 2295 ntBASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 TSPY23P-201ENST00000440136 739 ntBASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PRSS44-201ENST00000515154 1146 ntBASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 KRT8P11-201ENST00000409686 1436 ntBASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF111Q6ZNA4 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF111Q6ZNA4 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms