Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LPCAT4Q643R3 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 KRT8P32-201ENST00000512863 1461 ntBASIC17.27■□□□□ 0.36
LPCAT4Q643R3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
LPCAT4Q643R3 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 MYLKP1-201ENST00000509077 1580 ntBASIC17.27■□□□□ 0.35
LPCAT4Q643R3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.27■□□□□ 0.35
LPCAT4Q643R3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 PCDHA14-201ENST00000506751 2298 ntBASIC17.26■□□□□ 0.35
LPCAT4Q643R3 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 AC073210.2-201ENST00000430369 194 ntBASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SPI1-203ENST00000533030 661 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 AC106886.4-201ENST00000623557 2502 ntBASIC17.26■□□□□ 0.35
LPCAT4Q643R3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 HR-201ENST00000312841 5351 ntTSL 5 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.26■□□□□ 0.35
LPCAT4Q643R3 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 PHGDH-209ENST00000641074 1780 ntBASIC17.25■□□□□ 0.35
LPCAT4Q643R3 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 AC005829.2-201ENST00000571422 1056 ntBASIC17.25■□□□□ 0.35
LPCAT4Q643R3 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 AC008694.1-202ENST00000636953 945 ntBASIC17.25■□□□□ 0.35
LPCAT4Q643R3 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.25■□□□□ 0.35
LPCAT4Q643R3 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms