Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
RNF220Q5VTB9 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF220Q5VTB9 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 ESRRAP1-201ENST00000400596 1257 ntBASIC17.65■□□□□ 0.42
RNF220Q5VTB9 AC239809.2-201ENST00000415381 517 ntBASIC17.65■□□□□ 0.42
RNF220Q5VTB9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF220Q5VTB9 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF220Q5VTB9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
RNF220Q5VTB9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RNF220Q5VTB9 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.64■□□□□ 0.42
RNF220Q5VTB9 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.64■□□□□ 0.41
RNF220Q5VTB9 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 TSPY21P-201ENST00000433481 731 ntBASIC17.64■□□□□ 0.41
RNF220Q5VTB9 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 AL160286.2-201ENST00000567150 934 ntBASIC17.64■□□□□ 0.41
RNF220Q5VTB9 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF220Q5VTB9 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms