Protein–RNA interactions for Protein: Q5VSP4

LCN1P1, Putative lipocalin 1-like protein 1, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P1Q5VSP4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 HTR7P1-201ENST00000538670 1336 ntBASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LCN1P1Q5VSP4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 ID1-201ENST00000376105 1233 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 AC233263.1-201ENST00000578059 224 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 AC110285.5-201ENST00000611501 352 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 MYLKP1-201ENST00000509077 1580 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.59■□□□□ 0.25
LCN1P1Q5VSP4 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 AC008556.1-201ENST00000610908 2040 ntBASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 FER1L4-210ENST00000615531 5998 ntBASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
LCN1P1Q5VSP4 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 ENSA-205ENST00000361532 792 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 KSR1P1-201ENST00000446298 240 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AC133681.1-201ENST00000465482 601 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AC091390.4-202ENST00000476426 537 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AL353708.3-201ENST00000610272 989 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AC093677.2-201ENST00000600169 1863 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 PCDHA12-202ENST00000613593 2588 ntBASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.58■□□□□ 0.24
LCN1P1Q5VSP4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCN1P1Q5VSP4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
LCN1P1Q5VSP4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LCN1P1Q5VSP4 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LCN1P1Q5VSP4 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms