Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
ATPAF1Q5TC12 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
ATPAF1Q5TC12 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 AC097488.1-201ENST00000507834 756 ntBASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 AL355075.4-201ENST00000554988 638 ntBASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 GOLGA6L5P-202ENST00000515341 1828 ntBASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 AC099398.1-201ENST00000567919 2776 ntBASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 GNAS-203ENST00000306120 1878 ntBASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
ATPAF1Q5TC12 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
ATPAF1Q5TC12 AC134043.2-201ENST00000624206 2238 ntBASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms