Protein–RNA interactions for Protein: Q5RL73

RBM48, RNA-binding protein 48, humanhuman

Known RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM48Q5RL73 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 APTR-203ENST00000430801 583 ntTSL 5 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 KRT18P41-201ENST00000518924 1277 ntBASIC16.73■□□□□ 0.27
RBM48Q5RL73 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 AC011767.1-201ENST00000617410 1153 ntBASIC16.73■□□□□ 0.27
RBM48Q5RL73 AC006557.6-201ENST00000623071 864 ntBASIC16.73■□□□□ 0.27
RBM48Q5RL73 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
RBM48Q5RL73 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RBM48Q5RL73 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RBM48Q5RL73 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RBM48Q5RL73 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
RBM48Q5RL73 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RBM48Q5RL73 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.26
RBM48Q5RL73 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.71■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms