Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 RPPH1-201ENST00000516869 333 ntBASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 AL163051.1-201ENST00000569214 1512 ntBASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RUNDC3AQ59EK9 SIRPAP1-201ENST00000448467 1770 ntBASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 AC012317.2-201ENST00000623305 2251 ntBASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RUNDC3AQ59EK9 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AC139713.2-201ENST00000641328 2723 ntBASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AL645608.8-201ENST00000606034 2086 ntBASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AC099343.3-201ENST00000605834 2503 ntBASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 AC009102.3-201ENST00000623118 1491 ntBASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RUNDC3AQ59EK9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.28■□□□□ 0.36
RUNDC3AQ59EK9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms