Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SYPL1Q16563 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.06■□□□□ 0.32
SYPL1Q16563 C2orf69P3-201ENST00000565542 1120 ntBASIC17.06■□□□□ 0.32
SYPL1Q16563 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.06■□□□□ 0.32
SYPL1Q16563 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.06■□□□□ 0.32
SYPL1Q16563 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.06■□□□□ 0.32
SYPL1Q16563 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SYPL1Q16563 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SYPL1Q16563 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
SYPL1Q16563 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 KRT8P7-201ENST00000533003 1432 ntBASIC17.05■□□□□ 0.32
SYPL1Q16563 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
SYPL1Q16563 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.05■□□□□ 0.32
SYPL1Q16563 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.05■□□□□ 0.32
SYPL1Q16563 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.05■□□□□ 0.32
SYPL1Q16563 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 MIR4497-201ENST00000583208 89 ntBASIC17.05■□□□□ 0.32
SYPL1Q16563 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.05■□□□□ 0.32
SYPL1Q16563 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.05■□□□□ 0.32
SYPL1Q16563 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.05■□□□□ 0.32
SYPL1Q16563 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 CYP2D8P-201ENST00000433633 1490 ntBASIC17.05■□□□□ 0.32
SYPL1Q16563 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SYPL1Q16563 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SYPL1Q16563 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.05■□□□□ 0.32
SYPL1Q16563 KRT8P9-201ENST00000558927 1449 ntBASIC17.04■□□□□ 0.32
SYPL1Q16563 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
SYPL1Q16563 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.04■□□□□ 0.32
SYPL1Q16563 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 TSPY14P-201ENST00000303979 915 ntBASIC17.04■□□□□ 0.32
SYPL1Q16563 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.04■□□□□ 0.32
SYPL1Q16563 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.04■□□□□ 0.32
SYPL1Q16563 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.04■□□□□ 0.32
SYPL1Q16563 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.04■□□□□ 0.32
SYPL1Q16563 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SYPL1Q16563 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
SYPL1Q16563 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms