Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.77□□□□□ -0.04
CX3CL1P78423 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC14.77□□□□□ -0.04
CX3CL1P78423 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
CX3CL1P78423 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 HMGA1P5-201ENST00000412453 271 ntBASIC14.77□□□□□ -0.05
CX3CL1P78423 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 ELP6-205ENST00000439305 880 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 WWOX-216ENST00000569818 525 ntBASIC14.77□□□□□ -0.05
CX3CL1P78423 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.77□□□□□ -0.05
CX3CL1P78423 AC145285.6-201ENST00000604632 637 ntBASIC14.77□□□□□ -0.05
CX3CL1P78423 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
CX3CL1P78423 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC14.77□□□□□ -0.05
CX3CL1P78423 CR769767.2-201ENST00000622735 460 ntBASIC14.77□□□□□ -0.05
CX3CL1P78423 AC133561.5-201ENST00000635547 218 ntBASIC14.77□□□□□ -0.05
CX3CL1P78423 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.77□□□□□ -0.05
CX3CL1P78423 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
CX3CL1P78423 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
CX3CL1P78423 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 KRT8P45-201ENST00000414328 1447 ntBASIC14.76□□□□□ -0.05
CX3CL1P78423 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.76□□□□□ -0.05
CX3CL1P78423 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
CX3CL1P78423 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC14.76□□□□□ -0.05
CX3CL1P78423 AL512604.3-201ENST00000569583 964 ntBASIC14.76□□□□□ -0.05
CX3CL1P78423 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 GPX4-207ENST00000589115 812 ntTSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
CX3CL1P78423 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
CX3CL1P78423 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC14.76□□□□□ -0.05
CX3CL1P78423 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC14.75□□□□□ -0.05
CX3CL1P78423 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
CX3CL1P78423 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC14.75□□□□□ -0.05
CX3CL1P78423 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
CX3CL1P78423 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC14.75□□□□□ -0.05
CX3CL1P78423 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms