Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC12.97□□□□□ -0.33
RPL39P62891 OAS3-207ENST00000551007 998 ntTSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 AC060766.5-201ENST00000590539 871 ntBASIC12.97□□□□□ -0.33
RPL39P62891 AC008687.6-201ENST00000596318 630 ntBASIC12.97□□□□□ -0.33
RPL39P62891 AC080038.1-201ENST00000611274 1154 ntBASIC12.97□□□□□ -0.33
RPL39P62891 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC12.97□□□□□ -0.33
RPL39P62891 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
RPL39P62891 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
RPL39P62891 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RPL39P62891 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
RPL39P62891 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
RPL39P62891 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RPL39P62891 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC12.96□□□□□ -0.33
RPL39P62891 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
RPL39P62891 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC12.96□□□□□ -0.33
RPL39P62891 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
RPL39P62891 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC12.96□□□□□ -0.33
RPL39P62891 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.96□□□□□ -0.33
RPL39P62891 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.96□□□□□ -0.33
RPL39P62891 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC12.96□□□□□ -0.33
RPL39P62891 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC12.96□□□□□ -0.33
RPL39P62891 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC12.96□□□□□ -0.33
RPL39P62891 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
RPL39P62891 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
RPL39P62891 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC12.96□□□□□ -0.34
RPL39P62891 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
RPL39P62891 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
RPL39P62891 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC12.96□□□□□ -0.34
RPL39P62891 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 KRT8P11-201ENST00000409686 1436 ntBASIC12.96□□□□□ -0.34
RPL39P62891 KRT8P3-201ENST00000519669 1449 ntBASIC12.96□□□□□ -0.34
RPL39P62891 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC12.96□□□□□ -0.34
RPL39P62891 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC12.96□□□□□ -0.34
RPL39P62891 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
RPL39P62891 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 NME9-203ENST00000383180 2133 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 POU5F1P3-201ENST00000428824 1078 ntBASIC12.95□□□□□ -0.34
RPL39P62891 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC12.95□□□□□ -0.34
RPL39P62891 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
RPL39P62891 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC12.95□□□□□ -0.34
RPL39P62891 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC12.95□□□□□ -0.34
RPL39P62891 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 KLF2-202ENST00000592003 564 ntTSL 3 BASIC12.95□□□□□ -0.34
RPL39P62891 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms