Protein–RNA interactions for Protein: P59074

CHMP4BP1, Putative charged multivesicular body protein 4B-like protein CHMP4BP1, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1P59074 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 KRT8P3-201ENST00000519669 1449 ntBASIC20.91■□□□□ 0.94
CHMP4BP1P59074 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AC008556.1-201ENST00000610908 2040 ntBASIC20.91■□□□□ 0.94
CHMP4BP1P59074 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 AC016734.2-201ENST00000624325 1377 ntBASIC20.91■□□□□ 0.94
CHMP4BP1P59074 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CHMP4BP1P59074 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.9■□□□□ 0.94
CHMP4BP1P59074 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP4BP1P59074 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CHMP4BP1P59074 AL162741.1-201ENST00000565563 1558 ntBASIC20.89■□□□□ 0.94
CHMP4BP1P59074 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
CHMP4BP1P59074 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 SPEG-225ENST00000617028 815 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CHMP4BP1P59074 AL390961.4-201ENST00000623958 2535 ntBASIC20.88■□□□□ 0.93
CHMP4BP1P59074 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.88■□□□□ 0.93
CHMP4BP1P59074 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AC018470.1-201ENST00000624790 3129 ntBASIC20.88■□□□□ 0.93
CHMP4BP1P59074 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 KRT18P23-201ENST00000435622 1283 ntBASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AL136038.4-201ENST00000603606 1261 ntBASIC20.88■□□□□ 0.93
CHMP4BP1P59074 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CHMP4BP1P59074 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CHMP4BP1P59074 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms