Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
GTF2A1P52655 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
GTF2A1P52655 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
GTF2A1P52655 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.99■□□□□ 0.47
GTF2A1P52655 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
GTF2A1P52655 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC17.99■□□□□ 0.47
GTF2A1P52655 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.98■□□□□ 0.47
GTF2A1P52655 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
GTF2A1P52655 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.98■□□□□ 0.47
GTF2A1P52655 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.98■□□□□ 0.47
GTF2A1P52655 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.98■□□□□ 0.47
GTF2A1P52655 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC17.98■□□□□ 0.47
GTF2A1P52655 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.98■□□□□ 0.47
GTF2A1P52655 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
GTF2A1P52655 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 AL365209.1-201ENST00000624418 6473 ntBASIC17.97■□□□□ 0.47
GTF2A1P52655 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC17.97■□□□□ 0.47
GTF2A1P52655 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
GTF2A1P52655 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.97■□□□□ 0.47
GTF2A1P52655 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC17.97■□□□□ 0.47
GTF2A1P52655 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.97■□□□□ 0.47
GTF2A1P52655 MIR2861-201ENST00000636310 90 ntBASIC17.97■□□□□ 0.47
GTF2A1P52655 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
GTF2A1P52655 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.97■□□□□ 0.47
GTF2A1P52655 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC17.97■□□□□ 0.47
GTF2A1P52655 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
GTF2A1P52655 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.97■□□□□ 0.47
GTF2A1P52655 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.97■□□□□ 0.47
GTF2A1P52655 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC17.97■□□□□ 0.47
GTF2A1P52655 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 LYSMD4-203ENST00000378904 2122 ntBASIC17.96■□□□□ 0.47
GTF2A1P52655 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.96■□□□□ 0.47
GTF2A1P52655 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.96■□□□□ 0.47
GTF2A1P52655 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
GTF2A1P52655 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
GTF2A1P52655 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
GTF2A1P52655 MIR572-201ENST00000384983 95 ntBASIC17.96■□□□□ 0.47
GTF2A1P52655 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
GTF2A1P52655 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC17.96■□□□□ 0.47
GTF2A1P52655 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
GTF2A1P52655 MAG-206ENST00000597035 542 ntTSL 4 BASIC17.96■□□□□ 0.47
GTF2A1P52655 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC17.96■□□□□ 0.47
GTF2A1P52655 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC17.96■□□□□ 0.47
GTF2A1P52655 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
GTF2A1P52655 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
GTF2A1P52655 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms