Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
HCFC1P51610 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HCFC1P51610 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
HCFC1P51610 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC15.92■□□□□ 0.14
HCFC1P51610 AP000974.1-201ENST00000623909 2387 ntBASIC15.92■□□□□ 0.14
HCFC1P51610 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC15.92■□□□□ 0.14
HCFC1P51610 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
HCFC1P51610 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HCFC1P51610 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
HCFC1P51610 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
HCFC1P51610 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.91■□□□□ 0.14
HCFC1P51610 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 AL355877.3-201ENST00000622820 899 ntBASIC15.91■□□□□ 0.14
HCFC1P51610 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 AC018445.3-201ENST00000624177 1945 ntBASIC15.91■□□□□ 0.14
HCFC1P51610 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC15.91■□□□□ 0.14
HCFC1P51610 AP005117.1-201ENST00000584346 1413 ntBASIC15.91■□□□□ 0.14
HCFC1P51610 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.91■□□□□ 0.14
HCFC1P51610 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
HCFC1P51610 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 AC093503.3-201ENST00000624917 2352 ntBASIC15.91■□□□□ 0.14
HCFC1P51610 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.91■□□□□ 0.14
HCFC1P51610 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.91■□□□□ 0.14
HCFC1P51610 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
HCFC1P51610 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.9■□□□□ 0.14
HCFC1P51610 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
HCFC1P51610 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 AL024508.2-201ENST00000607749 1894 ntBASIC15.9■□□□□ 0.14
HCFC1P51610 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
HCFC1P51610 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.9■□□□□ 0.14
HCFC1P51610 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.9■□□□□ 0.14
HCFC1P51610 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.9■□□□□ 0.14
HCFC1P51610 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HCFC1P51610 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15.89■□□□□ 0.13
HCFC1P51610 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HCFC1P51610 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
HCFC1P51610 MIR1233-2-201ENST00000408138 82 ntBASIC15.89■□□□□ 0.13
HCFC1P51610 MIR1233-1-201ENST00000408722 82 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms