Protein–RNA interactions for Protein: P39086

GRIK1, Glutamate receptor ionotropic, kainate 1, humanhuman

Predictions only

Length 918 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK1P39086 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GRIK1P39086 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.27■□□□□ 0.68
GRIK1P39086 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.27■□□□□ 0.68
GRIK1P39086 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.27■□□□□ 0.68
GRIK1P39086 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.27■□□□□ 0.68
GRIK1P39086 MIR3180-1-201ENST00000580374 94 ntBASIC19.27■□□□□ 0.68
GRIK1P39086 AC090616.6-201ENST00000582640 721 ntBASIC19.27■□□□□ 0.68
GRIK1P39086 MIR3180-3-201ENST00000584616 94 ntBASIC19.27■□□□□ 0.68
GRIK1P39086 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.27■□□□□ 0.68
GRIK1P39086 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
GRIK1P39086 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.27■□□□□ 0.68
GRIK1P39086 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.27■□□□□ 0.68
GRIK1P39086 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 AL353692.3-201ENST00000407031 1396 ntBASIC19.27■□□□□ 0.68
GRIK1P39086 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GRIK1P39086 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GRIK1P39086 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
GRIK1P39086 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GRIK1P39086 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.27■□□□□ 0.67
GRIK1P39086 AC098818.2-201ENST00000564925 2320 ntBASIC19.26■□□□□ 0.67
GRIK1P39086 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.26■□□□□ 0.67
GRIK1P39086 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.26■□□□□ 0.67
GRIK1P39086 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.26■□□□□ 0.67
GRIK1P39086 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.26■□□□□ 0.67
GRIK1P39086 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.26■□□□□ 0.67
GRIK1P39086 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.26■□□□□ 0.67
GRIK1P39086 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.26■□□□□ 0.67
GRIK1P39086 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
GRIK1P39086 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 AL024508.2-201ENST00000607749 1894 ntBASIC19.26■□□□□ 0.67
GRIK1P39086 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GRIK1P39086 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GRIK1P39086 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
GRIK1P39086 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 GUSBP12-201ENST00000513727 720 ntBASIC19.25■□□□□ 0.67
GRIK1P39086 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 AC004263.2-201ENST00000617183 678 ntBASIC19.25■□□□□ 0.67
GRIK1P39086 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
GRIK1P39086 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 BCL2-203ENST00000589955 5011 ntBASIC19.25■□□□□ 0.67
GRIK1P39086 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
GRIK1P39086 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
GRIK1P39086 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.24■□□□□ 0.67
GRIK1P39086 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
GRIK1P39086 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.24■□□□□ 0.67
GRIK1P39086 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC19.24■□□□□ 0.67
GRIK1P39086 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.24■□□□□ 0.67
GRIK1P39086 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.24■□□□□ 0.67
GRIK1P39086 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
GRIK1P39086 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.24■□□□□ 0.67
GRIK1P39086 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC19.24■□□□□ 0.67
GRIK1P39086 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC19.24■□□□□ 0.67
GRIK1P39086 CLEC4GP1-201ENST00000596555 870 ntBASIC19.24■□□□□ 0.67
GRIK1P39086 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.24■□□□□ 0.67
GRIK1P39086 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms