Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CLCN1P35523 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CLCN1P35523 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC20.85■□□□□ 0.93
CLCN1P35523 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLCN1P35523 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCN1P35523 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 YBX1P10-201ENST00000444752 975 ntBASIC20.85■□□□□ 0.93
CLCN1P35523 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCN1P35523 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC20.85■□□□□ 0.93
CLCN1P35523 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.85■□□□□ 0.93
CLCN1P35523 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CLCN1P35523 AL023806.1-201ENST00000603994 1649 ntBASIC20.85■□□□□ 0.93
CLCN1P35523 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CLCN1P35523 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 PGR-209ENST00000617858 2816 ntTSL 5 BASIC20.85■□□□□ 0.93
CLCN1P35523 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
CLCN1P35523 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CLCN1P35523 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLCN1P35523 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.84■□□□□ 0.93
CLCN1P35523 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLCN1P35523 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLCN1P35523 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
CLCN1P35523 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCN1P35523 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.84■□□□□ 0.93
CLCN1P35523 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
CLCN1P35523 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.84■□□□□ 0.93
CLCN1P35523 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CLCN1P35523 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
CLCN1P35523 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
CLCN1P35523 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC20.83■□□□□ 0.93
CLCN1P35523 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
CLCN1P35523 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC20.83■□□□□ 0.93
CLCN1P35523 AP003097.1-201ENST00000530657 1135 ntBASIC20.83■□□□□ 0.93
CLCN1P35523 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.83■□□□□ 0.93
CLCN1P35523 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CLCN1P35523 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.83■□□□□ 0.93
CLCN1P35523 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN1P35523 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN1P35523 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN1P35523 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
CLCN1P35523 AC105020.1-201ENST00000435356 2205 ntBASIC20.82■□□□□ 0.92
CLCN1P35523 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
CLCN1P35523 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
CLCN1P35523 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCN1P35523 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCN1P35523 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.82■□□□□ 0.92
CLCN1P35523 AC026366.1-201ENST00000488803 879 ntBASIC20.82■□□□□ 0.92
CLCN1P35523 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCN1P35523 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCN1P35523 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCN1P35523 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.82■□□□□ 0.92
CLCN1P35523 Six3os1_6.1-201ENST00000620790 196 ntBASIC20.82■□□□□ 0.92
CLCN1P35523 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
CLCN1P35523 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CLCN1P35523 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms